24. V. A. Stupina, A. Meskauskas, J. C. Mccormack, Y. G. Yingling, B. A. Shapiro, J. D. Dinman, A. E. Simon, The 3' Proximal Translational Enhancer of Turnip Crinkle Virus Binds to 60S Ribosomal Subunits, RNA 14 (2008) 2379-2393. PDF

23. J. C. McCormack, X. Yuan, Y. G. Yingling, W. Kasprzak, R. E. Zamora, B. A. Shapiro, A. E. Simon Structural Domains Within the 3' UTR of Turnip Crinkle Virus, Journal of Virology 82 (2008) 8706-8720. PDF

22. B. A. Shapiro, E. Bindewald, W. Kasprzak, Y. G. Yingling, “Protocols for the In silico Design of RNA Nanostructures” in Nanostructure Design Methods and Protocols, Methods in Molecular Biology series, Vol. 474, E. Gazit and R. Nussinov, Eds., (Humana Press, 2008). Link

21. E.Bindewald, R. Hayes, Y. G. Yingling, W. Kasprzak, B. A. Shapiro, RNAJunction: a database of RNA junctions and kissing loops for three-dimensional structural analysis and nanodesign, Nucleic Acids Res. 36 (2008) D392-D397. PDF

20. Y. G. Yingling, B. A. Shapiro, Computational design of an RNA hexagonal nano-ring and an RNA nanotube, Nano Letters 7 (2007) 2328-2334. PDF

19. B. A. Shapiro, Y. G. Yingling, W. Kasprzak, E. Bindewald, Bridging the gap in RNA structure prediction, Current Opinion in Structural Biology 17 (2007) 157-165.  PDF

18. Y. G. Yingling, B. J. Garrison, Incorporation of chemical reactions into UV photochemical ablation of coarse-grained material, Applied Surface Science 253 (2007) 6377-6381.PDF

17. M. Prasad, P. F. Conforti, B. J. Garrison, Y. G. Yingling, Computational Investigation into the Mechanisms of UV Ablation of Poly (methyl methacrylate), Applied Surface Science 253 (2007) 6382-6385.PDF

16. Y. G. Yingling, B. A. Shapiro, The Impact of Dyskeratosis Congenita Mutations on Structure and Dynamics of the Telomerase RNA Pseudoknot Domain J. Biomol. Str. Dynam. 24 (2007) 303-320. PDF

15. P. F. Conforti, Y. G. Yingling and B. J. Garrison, Computational studies of ultraviolet ablation of poly(methyl methacrylate), Journal of Physics: Conference Series 59 (2007) 322-327.

14. Y. G. Yingling, B. A. Shapiro, The Prediction of the Wild-type Telomerase RNA Pseudoknot Structure and the Pivotal Role of a Bulge in its Formation, J Mol Graph Model 25 (2006) 261-274.  PDF

13. W. A. Hastings, Y. G. Yingling, G. S. Chirikjian, B. A. Shapiro, Structural and Dynamical Classification of RNA Single-Base Bulges for Nanostructure Design, J Comp Theor Nanoscience 3 (2006) 63-77.

12. Y. G. Yingling, B. J. Garrison, Coarse-Grained Model of Interaction of Light with Polymeric material - Onset of Ablation, Journal of Physical Chemistry B,109 (2005) 16482-16489.PDF

11. Y. G. Yingling, B. A. Shapiro, Dynamic Behavior of the Telomerase RNA Hairpin Structure and Its Relationship to Dyskeratosis Congenita, J Mol Biol, 348 (2005) 27.PDF

10. Y. G. Yingling, P. F. Conforti, B. J. Garrison, Theoretical Investigation of Laser Pulse Width Dependence in Thermal Confinement Regime, Appl. Phys. A, 79 (2004) 757. PDF

9. Y. G. Yingling and B. J. Garrison, Coarse Grained Chemical Reaction Model, J. Phys. Chem. B, Feature Article, 108 (2004) 1815. PDF

8. Y. G. Yingling and B. J. Garrison, Photochemical Ablation of Organic Solids, Nucl. Instrum. Methods Phys. Research B 203 (2003) 188. PDF

7. L. V. Zhigilei, E. Leveugle, B. J. Garrison, Y. G. Yingling, M. I. Zeifman, Computer Simulation of Laser Ablation of Molecular Substrates, Chemical Reviews 103 (2003) 321. PDF

6. L. V. Zhigilei, Y. G. Yingling, T. E. Itina, T. A. Schoolcraft, B. J. Garrison, MD Simulations of MALDesorption - Connections to Experiment, Int. J. Mass Spectrom. Ion Processes 226 (2003) 85. PDF

5. B. J. Garrison, A. Delcorte, L. V. Zhigilei, T. E. Itina, K. D. Krantzman, Y. G. Yingling, C. M. McQuaw, E. J. Smiley, N. Winograd, Big Molecule Ejection - SIMS vs. MALDI, Appl. Surf. Sci.69-71 (2003) 203. PDF

4. Y. G. Yingling and B. J. Garrison, Photochemical induced effects in material ejection in laser ablation, Chem. Phys. Lett. 364 (2002) 237. PDF

3. Y. G. Yingling, L. V. Zhigilei, B. J. Garrison, The Role of the Photochemical Fragmentation in Laser Ablation, J. Photochemistry and Photobiology A: Chemistry 145 (2001) 173. PDF

2. Y. G. Yingling, L. V. Zhigilei, B. J. Garrison, Photochemical Fragmentation Processes in Laser Ablation of Organic Solids, Nucl. Instrun. Methods Phys. Research B 180 (2001) 171. PDF

1. Y. G. Yingling, L. V. Zhigilei, B. J. Garrison, A. Koubenakis, J. Labrakis, S. Georgiou, Laser Ablation of bicomponent Systems: A Probe of Molecular Ejection Mechanisms, Appl. Phys. Lett. 78 (2001) 1631. PDF